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SHORTY

Addresses the problem of higher margin of sequencing errors and other artifacts. SHORTY is targeted for de novo assembly of microreads with mate pair information and sequencing errors. It has features in addressing the short-read assembly problem. Header file descriptions, paths and some issues were changed in the code to correct some errors in running process on sample data with the tool.

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SHORTY classification

SHORTY specifications

Software type:
Package/Module
Restrictions to use:
None
Computer skills:
Advanced
Maintained:
Yes
Interface:
Command line interface
Operating system:
Unix/Linux
Stability:
Stable

SHORTY distribution

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SHORTY support

Documentation

Link to literature

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