ShrinkBayes statistics

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Citations per year

Number of citations per year for the bioinformatics software tool ShrinkBayes
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Tool usage distribution map

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Associated diseases

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ShrinkBayes specifications

Information


Unique identifier OMICS_01961
Name ShrinkBayes
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Requirements
INLA, snowfall, VGAM, mclust, logcondens, Iso
Maintained No

Versioning


No version available

Maintainer


This tool is not available anymore.

Publication for ShrinkBayes

ShrinkBayes citation

library_books

Analysis of small sample clinical genomics studies using multi parameter shrinkage: application to high throughput RNA interference screening

2013
BMC Med Genomics
PMCID: 3654870
PMID: 23819807
DOI: 10.1186/1755-8794-6-S2-S1

[…] cular screen, deconvolution will be combined with a dose response curve to cisplatin to truly assess the sensitizing effect of siRNAs targeting the gene of interest.ShrinkHT is part of the R-package 'ShrinkBayes', under the function name 'ShrinkGauss'. ShrinkBayes also includes ShrinkSeq for the analysis of RNA-seq data. The package is available from http://www.few.vu.nl/~mavdwiel. We are convince […]


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ShrinkBayes institution(s)
Department of Epidemiology and Biostatistics, VU University medical center, Amsterdam, The Netherlands; Department of Mathematics, VU University, Amsterdam, The Netherlands; Department of Medical Oncology, VU University medical center, Amsterdam, The Netherlands; Department of Pathology, VU University medical center, Amsterdam, The Netherlands

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