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Short hairpin RNA databases | RNA interference

Shortly after the cellular mechanism of RNA interference (RNAi) was first described, scientists began using this powerful technique to study gene function. This included designing better methods for the successful delivery of small interfering RNAs…
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RNAi Codex
Dataset

RNAi Codex

Allows researchers worldwide access to information as well as allow purchase of…

Allows researchers worldwide access to information as well as allow purchase of the constructs. RNAi Codex holds data from the Hannon–Elledge shRNA library and allows the use of biologist-friendly…

HIVsirDB
Dataset

HIVsirDB

A manually curated database of HIV inhibiting siRNAs that provides…

A manually curated database of HIV inhibiting siRNAs that provides comprehensive information about each siRNA or shRNA. HIVsirDB structure contains sixteen fields including siRNA sequence, HIV…

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siRNA Wizard
Web

siRNA Wizard

Helps to select siRNA/shRNA sequences targeting gene(s) of interest. siRNA…

Helps to select siRNA/shRNA sequences targeting gene(s) of interest. siRNA Wizard selects siRNA/shRNA sequences that match criteria suggested by studies of RNA interference and which will have the…

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shRNAPred
Desktop

shRNAPred

Predicts shRNA-like regions from a large set of nucleotide sequences, by…

Predicts shRNA-like regions from a large set of nucleotide sequences, by considering an exhaustive list of hairpin parameters. shRNAPred will cater the needs of the researchers and scientists working…

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shRNA Registry
Dataset

shRNA Registry

Enables collaboration by establishing a centralized catalog of shRNA sequences.…

Enables collaboration by establishing a centralized catalog of shRNA sequences. You can use it to manage lists of shRNA sequences owned by your lab, search for specific sequences owned by any lab,…

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