SPINE specifications

Unique identifier:
OMICS_13472
Software type:
Framework/Library
Restrictions to use:
Academic or non-commercial use
Output data:
An integrated network of protein-protein and protein-DNA interactions
Programming languages:
C++
Stability:
Stable
Name:
Signaling-regulatory Pathway INferencE
Interface:
Command line interface
Input data:
A directed network of physical interactions, a collection of cause-effect pairs of genes
Operating system:
Unix/Linux
Computer skills:
Advanced
Maintained:
Yes

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SPINE distribution

download

SPINE support

Maintainer

  • Roded Sharan <>

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Publications

Institution(s)

School of Computer Science, Tel-Aviv University, Tel-Aviv, Israel; School of Medicine, Tel-Aviv University, Tel-Aviv, Israel; Department of Bioengineering, University of California, San Diego, CA, USA

Funding source(s)

This work was supported by an Alon Fellowship, by an Eshkol Fellowship from the Israeli Ministry of Science. This research was supported by the Israel Science Foundation (grant no. 385/06).

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