SPINE specifications


Unique identifier OMICS_13472
Name Signaling-regulatory Pathway INferencE
Software type Framework/Library
Interface Command line interface
Restrictions to use Academic or non-commercial use
Input data A directed network of physical interactions, a collection of cause-effect pairs of genes
Output data An integrated network of protein-protein and protein-DNA interactions
Operating system Unix/Linux
Programming languages C++
Computer skills Advanced
Stability Stable
Maintained Yes



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  • person_outline Roded Sharan <>

SPINE article

SPINE institution(s)
School of Computer Science, Tel-Aviv University, Tel-Aviv, Israel; School of Medicine, Tel-Aviv University, Tel-Aviv, Israel; Department of Bioengineering, University of California, San Diego, CA, USA
SPINE funding source(s)
This work was supported by an Alon Fellowship, by an Eshkol Fellowship from the Israeli Ministry of Science. This research was supported by the Israel Science Foundation (grant no. 385/06).

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