SASE-hunter specifications

Unique identifier:
OMICS_12288
Software type:
Pipeline/Workflow
Restrictions to use:
None
Operating system:
Unix/Linux
Computer skills:
Advanced
Source code URL:
https://codeload.github.com/kylessmith/SASE-hunter/zip/master
Name:
Signatures of Accelerated Somatic Evolution hunter
Interface:
Command line interface
Input format:
BED
Programming languages:
Python
Stability:
Stable
Maintained:
Yes

versioning

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No versioning.

SASE-hunter support

Documentation

Maintainer

  • Subhajyoti De <>

forum

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Credits

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Publications

Institution(s)

Department of Medicine, University of Colorado School of Medicine, Aurora, CO, USA; Computational Biosciences Program, University of Colorado-Denver, Aurora, CO, USA; Division of Hematology/Oncology, Department of Medicine, and Division of Immunopathology, Department of Pathology, Weill Cornell Medical College, New York, NY, USA; University of Colorado Cancer Center, Aurora, CO, USA; Gladstone Institutes and Department of Epidemiology and Biostatistics, University of California San Francisco, CA, USA; Department of Biostatistics and Informatics, Colorado School of Public Health, Aurora, CO, USA

Funding source(s)

American Cancer Society [ACS-IRG 57-001-53], Lung cancer SPORE [2P50-CA058187], United Against Lung Cancer grant (sponsored by Elliot’s Legacy and Joan’s Legacy) and Boettecher Foundation; Gladstone Institutes, a gift from the San Simeon Fund; 5R01-CA164780; Starr Cancer Consortium Grant [SCC-IA A608].

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