SAINT specifications

Unique identifier:
OMICS_16243
Software type:
Package/Module
Restrictions to use:
None
Output data:
Output file with 16 columns (Bait, Prey, PreyGene, Spec, SpecSum, AvgSpec, NumReplicate, ctrlCounts, AvgP, MaxP, TopoAvgP, TopoMaxP, SaintScore, FoldChange, Boosted_by, FDR)
Programming languages:
C
Version:
2.0
Requirements:
G++
Name:
Significance Analysis of INTeractome
Interface:
Command line interface
Input data:
Bait file, prey file, interaction file and interaction database file
Operating system:
Windows
Computer skills:
Advanced
Stability:
Stable
Maintained:
Yes

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SAINT distribution

download

SAINT support

Documentation

Maintainer

  • Alexey Nesvizhskii <>

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Publications

Funding source(s)

This work was supported by the Canadian Institute of Health Research (grants n°MOP84314 and MOP12246), the US National Institutes of Health (grants n°5R01RR024031, R01GM094231 and R01 CA126239), a Royal Society Wolfson Research Merit Award and a Scottish Universities Life Sciences Alliance Research Chair, a Canada Research Chair in Functional Proteomics and the Lea Reichmann Chair in Cancer Proteomics.

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