SAM specifications


Unique identifier OMICS_00779
Name SAM
Alternative name Significance Analysis of Microarrays
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
Computer skills Advanced
Stability Stable
Maintained Yes



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  • person_outline Gilbert Chu <>

SAM article

SAM citation

PMCID: 3440319

[…] (geo accession number: gse37912). genes on chromosomes x and y were removed to avoid the potential confounding factor of gender. sam (significance analysis of microarrays) [48], implemented in the samr library of the r statistical package [49], was used to compare log2-transformed gene expression levels between patients with complicated sarcoidosis and normal controls in the combined (aa […]

SAM institution(s)
Departments of Medicine and Biochemistry, Stanford University, Center for Clinical Sciences Research, CA, USA; Department of Health Research and Policy and Department of Statistics, Stanford University, Stanford, CA, USA
SAM funding source(s)
Supported by the Burroughs Wellcome Clinical Scientist Award and by National Institutes of Health (NIH)Grant CA77302, NIH Small Business Technology Transfer grant CA75675, Affymetrix, and by the Stanford Genome Training Grant.

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