SILP2 specifications


Unique identifier OMICS_12849
Name SILP2
Alternative names Scaffolding using Integer Linear Programming, SILP2
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages C, C++, Python
Computer skills Advanced
Stability Stable
Numpy, Networkx, Cplex, Bowtie2
Maintained Yes




No version available



  • person_outline James Lindsay

Publication for Scaffolding using Integer Linear Programming

SILP2 institution(s)
Computer Science and Engineering Department, University of Connecticut, Storrs, CT, USA; Department of Computer Science, Georgia State University, Atlanta, GA, USA
SILP2 funding source(s)
This work has been partially supported by Agriculture and Food Research Initiative Competitive Grant no. 201167016-30331 from the USDA National Institute of Food and Agriculture and NSF awards IIS-0916401 and IIS-0916948.

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