SIMBA specifications

Information


Unique identifier OMICS_21876
Name SIMBA
Alternative name SImple Manager for Bacterial Assemblies
Software type Toolkit/Suite
Interface Graphical user interface
Restrictions to use None
Input format BAM,SFF,FASTQ,XML
Output format BAM,SFF,FASTQ,XML
Operating system Unix/Linux
Programming languages PHP, Python
Database management system SQLite
License GNU General Public License version 3.0
Computer skills Medium
Version 1.2.1
Stability Stable
Requirements Apache server, PHP, Mcrypt, Imagick, PHP-SQLite, Biopython, NCBI-BLAST+
Maintained Yes

Download


Versioning


Add your version

Documentation


Additional information


SIMBA Virtual Machine is also available via Virtual Machine

Publication for SImple Manager for Bacterial Assemblies

SIMBA institution(s)
Laboratory of Cellular and Molecular Genetics, Department of General Biology, Institute of Biological Sciences, Federal University of Minas Gerais, Belo Horizonte, Minas Gerais, Brazil; National Reference Laboratory for Aquatic Animal Diseases of Ministry of Agriculture, Livestock and Food Supply, Federal University of Minas Gerais, Belo Horizonte, Minas Gerais, Brazil; Centre for Genomics and Applied Gene Technology, Institute of Integrative Omics and Applied Biotechnology (IIOAB), Nonakuri, PurbaMedinipur, India; Department of Computer Science, Virginia Commonwealth University, Richmond, VA, USA; Institute of Biological Sciences, Federal University of Pará, Belém, Pará, Brazil; Federal University of Minas Gerais, Institute of Biological Sciences, Pampulha, Belo Horizonte, Minas Gerais, Brazil
SIMBA funding source(s)
Supported by The Agencies CAPES (program Capes/Cofecub), FAPEMIG, FAPESPA and CNPq.

SIMBA reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review SIMBA