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chevron_left MS-based lipidomics data visualization Lipid quantification Lipid identification Peak detection Spectral deconvolution Chromatogram alignment Noise filtering chevron_right
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SimLipid specifications

Information


Unique identifier OMICS_02515
Name SimLipid
Interface Web user interface
Restrictions to use License purchase required
Programming languages Java
License Commercial
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Beacon Designer Team

SimLipid citations

 (4)
library_books

Plasma Lipidomic Signature of Rectal Adenocarcinoma Reveals Potential Biomarkers

2018
PMCID: 5766651
PMID: 29359123
DOI: 10.3389/fonc.2017.00325

[…] of the ions had their identification confirmed by their collision-induced dissociation displayed in their ms/ms spectra (table ). ions that could not be evaluated by ms/ms were identified with the simlipid software (premier biosoft international, ca, usa)., aidentified by ms/ms fragmentation pattern., bidentified by exact mass only., top 15 variables (ions with their m/z) that significantly […]

library_books

Annotation of the human cerebrospinal fluid lipidome using high resolution mass spectrometry and a dedicated data processing workflow

2016
Metabolomics
PMCID: 4824825
PMID: 27110228
DOI: 10.1007/s11306-016-1023-8

[…] ). in parallel, manufacturers have also developed commercial software tools, such as lipid search from thermofisher scientific (taguchi and ishikawa ), lipid view from ab sciex (ejsing et al. ) or simlipid from premier biosoft, for direct annotation from raw data. however, reliable lipidomic data treatment workflows able to handle the detection and alignment of features, together […]

library_books

Lipid Fingerprinting in Mild versus Severe Forms of Gestational Diabetes Mellitus

2015
PLoS One
PMCID: 4669127
PMID: 26633694
DOI: 10.1371/journal.pone.0144027

[…] discriminatory effect between the groups in the component with higher power projection. considering the masses of the differentially expressed ions, the lipids were identified with the aid of simlipid 3.0 software (premier biosoft, palo alto, ca, usa), with a maximum acceptable error of 50ppm, positive polarity (m+h, m+na and m+k) and selecting only the following categories: […]

library_books

Composition and Localization of Lipids in Penaeus merguiensis Ovaries during the Ovarian Maturation Cycle as Revealed by Imaging Mass Spectrometry

2012
PLoS One
PMCID: 3303810
PMID: 22432001
DOI: 10.1371/journal.pone.0033154

[…] pc molecules. therefore, lipid molecules for which only partial fragment ions could be obtained were identified by an online database search (http://www.hmdb.ca/labm/jsp/mlims/msdbparent.jsp) and simlipid software version 1.0. the underlined molecules were identified from ms/ms analysis and had complete fragment ion spectra., the underlined molecules were identified from ms/ms analysis […]


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SimLipid institution(s)
PREMIER Biosoft, CA, USA

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