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Plasma Lipidomic Signature of Rectal Adenocarcinoma Reveals Potential Biomarkers
[…] me of the ions had their identification confirmed by their collision-induced dissociation displayed in their MS/MS spectra (Table ). Ions that could not be evaluated by MS/MS were identified with the SimLipid software (PREMIER Biosoft International, CA, USA).Top 15 variables (ions with their m/z) that significantly contributed to the discrimination between groups were selected, resulting in a 20 V […]
Annotation of the human cerebrospinal fluid lipidome using high resolution mass spectrometry and a dedicated data processing workflow
[…] l. ). In parallel, manufacturers have also developed commercial software tools, such as Lipid Search from ThermoFisher Scientific (Taguchi and Ishikawa ), Lipid View from AB Sciex (Ejsing et al. ) or SimLipid from Premier Biosoft, for direct annotation from raw data. However, reliable lipidomic data treatment workflows able to handle the detection and alignment of features, together with selection […]
Lipid Fingerprinting in Mild versus Severe Forms of Gestational Diabetes Mellitus
[…] greater discriminatory effect between the groups in the component with higher power projection. Considering the masses of the differentially expressed ions, the lipids were identified with the aid of SimLipid 3.0 software (PREMIER Biosoft, Palo Alto, CA, USA), with a maximum acceptable error of 50ppm, positive polarity (M+H, M+Na and M+K) and selecting only the following categories: Glycerophospho […]
Composition and Localization of Lipids in Penaeus merguiensis Ovaries during the Ovarian Maturation Cycle as Revealed by Imaging Mass Spectrometry
[…] djusted between 40 to 50 V during fragmentation of the lipid molecules. An online lipid database search, using Metabolite MS Search (http://www.hmdb.ca/labm/jsp/mlims/MSDbParent.jsp) and the software SimLipid Version 1.0 (PREMIER Biosoft International, Palo Alto, CA, USA), was performed to identify molecules from their partial fragment spectra. […]
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