SmashCell specifications


Unique identifier OMICS_09046
Name Simple Metagenomics Analysis SHell-for sequences from single Cells
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Python
Computer skills Advanced
Stability Stable
Maintained Yes


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  • person_outline Eoghan D. Harrington <>

SmashCell article

SmashCell institution(s)
Department of Microbiology and Immunology; Department of Medicine, Stanford University School of Medicine, Stanford, CA, USA; EMBL, Heidelberg, Germany; VIB - Vrije Universiteit Brussel, Brussels, Belgium; Max Delbrück Center for Molecular Medicine, Berlin, Germany; Veterans Affairs Palo Alto Health Care System, Palo Alto, CA, USA

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