Simple Phylogeny pipeline

Simple Phylogeny specifications


Unique identifier OMICS_17615
Name Simple Phylogeny
Interface Web user interface
Restrictions to use None
Input data A multiple sequence alignment.
Input format Clustal, FASTA, MSF
Output format Clustal, Distance Matrix, NEXUS
Computer skills Basic
Stability Stable
Maintained Yes

Simple Phylogeny IN pipelines

PMCID: 5516332
PMID: 28724407
DOI: 10.1186/s12864-017-3942-9

[…] and other works [9]. protein multiple alignment was done with the online tool clustal omega, and the phylogenetic tree was constructed using the neighbor-joining statistical method with the simple phylogeny tool using the default parameters. the tree, originally in the newick format, was visualized with mega 6.0 software [37], and the resulting tree is presented in fig. 3.fig. 3 , […]

PMCID: 5590126
PMID: 28912832
DOI: 10.1186/s13068-017-0898-6

[…] []. phylogenetic trees were generated by itol version 3 [] according to the “one click” phylogeny analysis tool []. signal peptide sequences were predicted using the signalp server []. amino acid sequence logos were performed using the weblogo3 […]

PMCID: 4914512
PMID: 27445992
DOI: 10.3389/fmicb.2016.00884

[…] , , , , , , , the supplementary material for this article can be found online at: […]

Simple Phylogeny reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review Simple Phylogeny