SIMPLEX specifications

Unique identifier:
OMICS_00294
Interface:
Command line interface
Input data:
The raw sequence reads, their corresponding base calling quality values, and a list of genomic positions specifying the complete exome.
Output data:
A detailed summary report, files that can be used for viewing mapping results in Genome Browsers, and annotated lists of variants, which can be easily opened with office programs.
Computer skills:
Advanced
Software type:
Pipeline/Workflow
Restrictions to use:
None
Input format:
FASTQ, FASTA
License:
GNU Affero General Public License version 3
Stability:
Stable

SIMPLEX distribution

download

SIMPLEX support

Documentation

Maintainers

This tool is not maintained anymore.

forum

tutorial arrow
×
Communicate with other users
Participate in the forum to get support for using tools. Ask questions about technical specifications.
Take part in the discussion
Sign up for free to ask question and share your advices

No open topic.

Credits

tutorial arrow
×
Promote your skills
Define all the tasks you managed and assign your profile the appropriate badges. Become an active member.
Promote your work
Sign up for free to badge your contributorship

Publications

Institution(s)

Division for Bioinformatics, Biocenter, Innsbruck Medical University, Innsbruck, Austria; Oncotyrol, Center for Personalized Cancer Medicine, Innsbruck, Austria; Division of Human Genetics, Biocenter, Innsbruck Medical University, Innsbruck, Austria

Funding source(s)

Supported by GENAU Bioinformatics Network (BIN III), by the "Bioinformatics Tyrol" project of the "Standortagentur Tyrol," and by the COMET Center ONCOTYROL.

User review

tutorial arrow
×
Vote up tools and offer feedback
Give value to tools and make your expertise visible
Give your feedback on this tool
Sign up for free to join and share with the community

0 user reviews

star_border star_border star_border star_border star_border
star star star star star

0 user reviews

star_border star_border star_border star_border star_border
star star star star star

No review has been posted.