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SimTracker specifications


Unique identifier OMICS_14149
Name SimTracker
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages MATLAB
Computer skills Advanced
Stability Stable
Maintained Yes



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  • person_outline Marianne Bezaire <>

Publication for SimTracker

SimTracker in publication

PMCID: 5313080
PMID: 28009257
DOI: 10.7554/eLife.18566.172

[…] and simulation result data sets used in this work are available online () at ( so the same simulations can easily be repeated with a future, updated model using simtracker (). mindful that this model could be used by people with a broad range of modeling experience, we have made freely available our custom software simtracker (rrid:scr_014735) that works […]

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SimTracker institution(s)
Department of Neurosurgery, Stanford University, Stanford, CA, USA; Department of Anatomy and Neurobiology, University of California, Irvine, CA, USA; Pediatric Neurology Department, Johns Hopkins Hospital, Baltimore, MD, USA; Department of Psychological and Brain Sciences, Boston University, Boston, MA, USA
SimTracker funding source(s)
This work was funded by the National Institutes of Health, grant numbers NS35915 and BRAIN Initiative NS90583, F32-NS090753, and R01-NS11613, as well as the National Science Foundation, grant number DGE-0808392 and 1458495. This work used the Extreme Science and Engineering Discovery Environment (XSEDE), which is supported by National Science Foundation grant number ACI-1053575. Specifically, the National Science Foundation provided supercomputing resources via an XSEDE Research Allocation (TG-IBN140007) and XSEDE Startup Allocations (TG-IBN130022) and (TG-IBN100011) and via the Neuroscience Gateway with the support of NSF grant 1458840.

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