Online

Provides a text-based way to read, summarize, and create SED-ML files. PhraSED-ML allows modelers to use simple text commands to encode various elements of SED-ML (models, tasks, simulations, and results) in a format easy to read and modify. The phraSED-ML is designed to be easily readable and writable without the need to reference the documentation at each turn. SED-ML continues to be developed by the community and changes to phraSED-ML will follow this development.

User report

×
Vote up tools and offer feedback
Give value to tools and make your expertise visible

0 user reviews

0 user reviews

No review has been posted.

phraSED-ML forum

×
Communicate with other users
Participate in the forum to get support for using tools. Ask questions about technical specifications.

No open topic.

phraSED-ML versioning

×
Upload and version your source code
Get your DOI for better tool traceability. Archive your releases so the community can easily visualize progress on you work.

No versioning.

phraSED-ML classification

phraSED-ML specifications

Software type:
Application/Script
Restrictions to use:
None
Operating system:
Unix/Linux, Mac OS, Windows
License:
BSD 3-clause “New” or “Revised” License
Version:
1.0.3
Maintained:
Yes
Interface:
Command line interface
Output data:
Graph
Programming languages:
C++, Python
Computer skills:
Advanced
Stability:
Stable
Source code URL:
https://sourceforge.net/p/phrasedml/code/HEAD/tree/
Issue URL:
https://sourceforge.net/p/phrasedml/tickets/?source=navbar

phraSED-ML support

Documentation

Credits

×
Promote your skills
Define all the tasks you managed and assign your profile the appropriate badges. Become an active member.

Publications

Institution(s)

University of Washington Department of Bioengineering, Seattle, WA, USA

Funding source(s)

This work was supported by NIGMS of the National Institutes of Health under award number R01GM081070.

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.