SinBaD statistics

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Citations per year

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Popular tool citations

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Tool usage distribution map

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Associated diseases

Associated diseases

SinBaD specifications

Information


Unique identifier OMICS_23846
Name SinBaD
Alternative name Sequence-Information-Based-decision-Model
Interface Web user interface
Restrictions to use Academic or non-commercial use
Input format VCF
Output format VCF,CSV
Computer skills Basic
Maintained No

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Publication for Sequence-Information-Based-decision-Model

SinBaD in publications

 (2)
PMCID: 4602202
PMID: 26459872
DOI: 10.1038/srep14955

[…] the function of its hosting gene, and these scores were calculated by such bioinformatics approaches as sift, polyphen2, lrt, mutationtaster, mutationaccessor, msrv, gerp, phylop, siphy, cadd and sinbad. the 8 association scores measured the likelihood that a gene containing a variant would associate with a query disease, and such scores were derived according to the “guilt-by-association” […]

PMCID: 3572689
PMID: 23431257
DOI: 10.1155/2013/675851

[…] software for users to facilitate their own research. in , we list eleven widely used tools, including sift [], polyphen [], snap [], msrv [], lrt [], polyphen-2 [], mutationtaster [], kggseq [], sinbad [], gerp [], and phylop []. the input data for a prediction tool usually requires the protein sequence or protein id, the amino acid substitution, position of the substitution, chromosome, […]


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SinBaD institution(s)
Molecular and Computational Biology, University of Southern California, Los Angeles, CA, USA
SinBaD funding source(s)
Supported by NIH Center of Excellence in Genomic Sciences (NIH/HG 2 P50 HG002790-06 and NIH/NHGRI 1U01 HG006531-01).

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