SCICAST specifications

Information


Unique identifier OMICS_13654
Name SCICAST
Alternative name Single Cell Iterative Clustering and Significance Testing
Software type Package/Module
Interface Command line interface
Restrictions to use Academic or non-commercial use
Input data Single Cell sequencing data
Input format tab delimited text
Output data pdf graphics, cluster, pca, significance testing, gene networks
Output format PDF, TXT
Operating system Unix/Linux, Mac OS
Programming languages Python, R
License MIT License
Computer skills Advanced
Version 0.2
Stability Alpha
Requirements seaborn, Numpy, Scipy, rpy2, Pandas
Maintained Yes

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Maintainer


SCICAST institution(s)
UCSF, San Francisco, CA, USA

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