Sake specifications


Unique identifier OMICS_18062
Name Sake
Alternative name Single-cell RNA-Seq Analysis and Klustering Evaluation
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data Gene count data file, pre-loaded demo data file.
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 2.0
Computer skills Advanced
Version 0.4.0
Stability Stable
Maintained Yes



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  • person_outline Molly Hammell <>
  • person_outline Ray Ho <>

Additional information

Sake article

Sake institution(s)
Watson School of Biological Science, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA; Department of Molecular and Cellular Biology, Stony Brook University, NY, USA; Department of Biological Science, University of Notre Dame, IN, USA; Middlebury College, Middlebury, VT, USA; Mount Sinai Health System, New York, NY, USA; Department of Biological Science, University of Southern California, CA, USA
Sake funding source(s)
Supported by the Ministry of Education in Taiwan, The Florence Gould Foundation, the Rita Allen Foundation and Amazon Web Services.

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