Single-cell RNA sequencing data analysis software tools

Single-cell RNA sequencing data analysis software tools

Single-cell RNA-sequencing (scRNAseq) enables to unravel the heterogeneity of cell genotype, phenotype, and function within a given subpopulation by applying high-throughput sequencing to individual cells. ScRNA-seq has a wide variety of applications in immunology, cancerology, and the study of development. This technology has already permitted to refine our comprehension of differentiation decisions made by histologically identical cells, to identify new cell types and states within organs, and has promising applications in personalized medicine for cancer and biomarker identification.

Data preprocessing

Data processing

Quantification

Data analysis

Expression

Data visualization

Classification/Clustering

Network analysis

Integrative analysis

File manipulation

Utilities

Unclassified tools