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SiPAN specifications


Unique identifier OMICS_08017
Name SiPAN
Alternative name SImultaneous Prediction and Alignment of Networks
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages C++
Computer skills Advanced
Stability No
Maintained No


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Publication for SImultaneous Prediction and Alignment of Networks

SiPAN citations


A feedback mechanism between PLD and deadenylase PARN for the shortening of eukaryotic poly(A) mRNA tails that is deregulated in cancer cells

PMCID: 5312095
PMID: 28011629
DOI: 10.1242/bio.021261

[…] C shows a Coomassie-stained gel that indicates the high purity of the recombinant, purified proteins used. PARN deadenylase activity was effectively silenced in cells with siPARN RNA (D) but not with siPAN2 RNA. This indicates that in our assay conditions, PAN2 did not contribute to the deadenylase activity found in cell lysates. Fig. 6.A further control for these activity experiments is shown in […]


The Oldest Case of Decapitation in the New World (Lapa do Santo, East Central Brazil)

PLoS One
PMCID: 4580647
PMID: 26397983
DOI: 10.1371/journal.pone.0137456

[…] r headless bodies are a product of decapitation (i.e., perimortem removal of the head) [,]. In addition to humans, llamas’ decapitated heads were also included in tombs and graves (e.g., Huaca Rajada Sipán [] and Dos Cabezas Tomb 2 [,]). During the earlier Gallinazo period, in Huacas de Moche, a single case of skull removal is known for burial G2. The skull was removed and replaced by a pottery ja […]


The Globalization of Traditional Medicine in Northern Peru: From Shamanism to Molecules

PMCID: 3888705
PMID: 24454490
DOI: 10.1155/2013/291903

[…] of these plants are frequently found on Moche ceramics, and the remains of some were found in a variety of burials of high-ranking individuals of the Moche elite, for example, the tomb of the Lord of Sipán []. […]


Trace Metal Content of Sediments Close to Mine Sites in the Andean Region

Sci World J
PMCID: 3353313
PMID: 22606058
DOI: 10.1100/2012/732519

[…] ere are no other productive activities such as tanning or intensive farming []. Two study areas were selected, each one in a different subbasin: Llapa and Rejo (see ). The Llapa subbasin includes the Sipán SL mine and the Rejo subbasin includes part of the Minera Yanacocha SRL mine. In both mines, gold extraction has been performed with cyanide leaching and the Sipán SL mine was closed in 2005. Th […]


Naming a phantom – the quest to find the identity of Ulluchu, an unidentified ceremonial plant of the Moche culture in Northern Peru

PMCID: 2670266
PMID: 19335907
DOI: 10.1186/1746-4269-5-8

[…] rposes. McClelland concluded that the largest remaining challenge was the identification of Ulluchu.In the present paper we build on the work of Donna McClelland and the archaeological excavations at Sipán in the Lambayeque Valley [,] and at Dos Cabezas in the Jequetepeque Valley in the 1990s []. […]


Traditional medicinal plant use in Northern Peru: tracking two thousand years of healing culture

PMCID: 1637095
PMID: 17090303
DOI: 10.1186/1746-4269-2-47

[…] ations of these plants are frequently found on Moche ceramics, and the remains of some were found in a variety of burials of high-ranking individuals of the Moche elite, e.g. the tomb of the "Lord of Sipan." […]


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SiPAN institution(s)
Center for Non-Coding RNA in Technology and Health, Department of Veterinary Clinical and Animal Sciences, University of Copenhagen, Copenhagen, Denmark; Department of Computer Engineering, Kadir Has University, Cibali, Istanbul, Turkey
SiPAN funding source(s)
Supported in part by The Scientific and Technological Research Council of Turkey (TUBITAK) [112E137].

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