SIRAH tools specifications

Information


Unique identifier OMICS_13262
Name SIRAH tools
Alternative name Southamerica Initiative for a Rapid and Accurate Hamiltonian tools
Software type Toolkit/Suite
Interface Command line interface
Restrictions to use None
Input data Heavy atoms composing the DNA molecule
Input format PDB, PQR
Output data Transforms residue coordinates to coarse-grained following mapping rules described in, so called, map files.
Operating system Unix/Linux, Mac OS, Windows
Programming languages Perl
Computer skills Advanced
Stability Stable
Requirements GROMACS, VMD
Maintained Yes

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Maintainer


  • person_outline Matias Machado <>

Publication for Southamerica Initiative for a Rapid and Accurate Hamiltonian tools

SIRAH tools institution(s)
Biomolecular simulations, Institut Pasteur de Montevideo, Montevideo, Uruguay
SIRAH tools funding source(s)
This work was partially funded by FOCEM (MERCOSUR Structural Convergence Fund), COF 03/11.

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