SIRIUS protocols

SIRIUS specifications

Information


Unique identifier OMICS_04680
Name SIRIUS
Alternative name Sum formula Identification by Ranking Isotope patterns Using mass Spectrometry
Software type Application/Script
Interface Command line interface, Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java
Computer skills Advanced
Version 4.0
Stability Stable
Maintained Yes

Download


Versioning


Add your version

Maintainers


  • person_outline Sebastian Bocker <>
  • person_outline Sirius Team <>

Publications for Sum formula Identification by Ranking Isotope patterns Using mass Spectrometry

SIRIUS IN pipelines

 (2)
2016
PMCID: 5192443
PMID: 27775610
DOI: 10.3390/metabo6040037

[…] on the basis of isotope clusters. we use 11 lc-ms measurements with 48 known compounds and select a set of 72 ions. we predict for each ion a list of ranked molecular formula candidates using sirius and evaluate the rank of the correct molecular formula [3]., we evaluate the performance of predicted isotope rois described in section 4.1 and the isotope detection routine with mass–specific […]

2016
PMCID: 5192443
PMID: 27775610
DOI: 10.3390/metabo6040037

[…] detection routine with mass–specific isotope cluster validation described in section 4.2 on 11 lc-ms measurements of known compounds described in section 4.4 using predicted molecular formulas from sirius as described in the appendix d.4. we quantify the performance using the number of compounds with a certain rank averaged over all measurements. if the proposed approaches increase the quality […]

SIRIUS institution(s)
Friedrich-Schiller-University, Jena, Germany

SIRIUS reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review SIRIUS