siRNA off-target discovery pipeline specifications
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siRNA off-target discovery pipeline distribution
siRNA off-target discovery pipeline support
- Jan Gorodkin <>
No open topic.
(Alkan et al., 2017)
RIsearch2: suffix array-based large-scale prediction of RNA-RNA interactions and siRNA off-targets.
Nucleic Acids Res.
PMID: 28108657 DOI: 10.1093/nar/gkw1325
Center for non-coding RNA in Technology and Health, University of Copenhagen, Denmark; Department of Veterinary Clinical and Animal Science, University of Copenhagen, Denmark; Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Copenhagen, Denmark; Institute for Theoretical Chemistry, University of Vienna, Wien, Austria; Bioinformatics Group, Department of Computer Science & IZBI-Interdisciplinary Center for Bioinformatics & LIFE-Leipzig Research Center for Civilization Diseases & Competence Center for Scalable Data Services and Solutions, University Leipzig, Leipzig, Germany; Max Planck Institute for Mathematics in the Sciences, Leipzig, Germany; Santa Fe Institute, Santa Fe, NM, USA; Research Group Bioinformatics and Computational Biology, Faculty of Computer Science, University of Vienna, Wien, Austria
Supported by Danish Council for Independent Research (Technology and Production Sciences); Danish Center for Scientific Computing (DCSC/DEiC); Innovation Fund Denmark (Programme Commission on Strategic Growth Technologies) [0603-00320B]; Austrian FWF project ‘SFB F43 RNA regulation of the transcriptome’.
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