SitEx specifications

Information


Unique identifier OMICS_21182
Name SitEx
Restrictions to use None
Database management system MySQL
Community driven No
Data access Browse
User data submission Not allowed
Version 2.0
Maintained No
Wikipedia https://en.wikipedia.org/wiki/SitEx

Maintainers


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Additional information


http://www-bionet.sscc.ru/sitex/help.php

Publications for SitEx

SitEx citation

library_books

Identifying transcriptional start sites of human microRNAs based on high throughput sequencing data

2011
Nucleic Acids Res
PMCID: 3241639
PMID: 21821656
DOI: 10.1093/nar/gkr604

[…] ing density function: where x denotes the density of each locus within a representative region possibly contained miRNA TSSs; Loci represents the location of site i; and Locx denotes the location of sitex. The total number of sites detected in the representative region is denoted as n. We recommend a putative miRNA TSS if the locus has the highest density of CAGE tags and TSS Seq tags. Since poly […]

SitEx institution(s)
Institute of Cytology and Genetics, Siberian Branch of Russian Academy of Sciences, Novosibirsk, Russia; Novosibirsk State University, Novosibirsk, Russia
SitEx funding source(s)
Supported by RFBR Grant No. 15-04-08065, RSF Grant No. 14-44-00011, and RSF Grant No. 14-14-00269.

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