SLAPenrich specifications

Information


Unique identifier OMICS_13952
Name SLAPenrich
Alternative name Sample Level Analysis of Pathway Alteration Enrichments
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License MIT License
Computer skills Advanced
Version 0.1
Stability Stable
Requirements HGNChelper, igraph, pheatmap, poibin, stringr, qvalue, biomaRt
Maintained Yes

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Documentation


Maintainer


  • person_outline Francesco Iorio <>

Publication for Sample Level Analysis of Pathway Alteration Enrichments

SLAPenrich institution(s)
European Molecular Biology Laboratory - European Bioinformatics Institute, Wellcome Genome Campus, Cambridge, UK; Wellcome Trust Sanger Institute, Wellcome Genome Campus, Cambridge, UK; GlaxoSmithKline, Stevenage Herts, UK; Joint Research Centre for Computational Biomedicine (JRC-COMBINE), RWTH Aachen University, Faculty of Medicine, MTI2 Wendlingweg 2, Aachen, Germany; OpenTargets, Wellcome Genome Campus, Cambridge, UK
SLAPenrich funding source(s)
Supported by OpenTargets (Projects OpenTargets15 and OpenTargets16).

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