Slicer Detector statistics

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Associated diseases

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Slicer Detector specifications

Information


Unique identifier OMICS_16362
Name Slicer Detector
Interface Web user interface
Restrictions to use None
Input data The genomic sequence, the selected database.
Input format FASTA
Output data The reported slicers, the report of alignment between the genes and slicers.
Output format FASTA
Programming languages Javascript, Perl
Computer skills Basic
Stability No
Maintained No

Maintainer


This tool is not available anymore.

Publication for Slicer Detector

Slicer Detector in publication

PMCID: 5766230
PMID: 29293695
DOI: 10.1371/journal.ppat.1006756

[…] respectively, while the levels remained low in all vf36 tomato plants (). these results show that n-mediated immunity and n-expression are also subject to developmental regulation in tomato. then slicer detector analysis was performed. using n transcript sequences and the solanaceae small rna databases [], we identified conserved mir6019/mir6020 in n. benthamiana and mir6020 in s. […]


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Slicer Detector institution(s)
Department of Plant and Microbial Biology, Plant Gene Expression Center, University of California, Berkeley, CA, USA; United States Department of Agriculture-Agricultural Research Services, Albany, CA, USA
Slicer Detector funding source(s)
This work was supported by the National Science Foundation Plant Genome Research Program Grant (DBI-0218166) and the United States Department of Agriculture (CRIS 5335-22000-007-00D).

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