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SlideJ specifications


Unique identifier OMICS_19436
Name SlideJ
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Output data Some slides in Aperio SVS, Leica SCN, Hamamatsu .NDPI, Mirax, Generic tiled TIFF and regular TIFF.
Operating system Unix/Linux
Programming languages Java
License GNU Lesser General Public License version 3.0
Computer skills Medium
Stability Stable
Maintained Yes



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  • person_outline Vincenzo Della Mea <>

Publication for SlideJ

SlideJ in publication

PMCID: 2496918
PMID: 18638416
DOI: 10.1186/1471-2105-9-314

[…] across probes., in most cases being shown in this paper, the linear model, including factors of interest dye, slide, treatment and sample replicates, can be written as:, (1)yijkl = α + dyei + slidej + treatk + samplel + ϵijkl, , where the index i refers to different channels (dyes), the index j to arrays, the index k to treatment levels and the index l to the sample replicates within […]

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SlideJ institution(s)
Department of Mathematics, Computer Science and Physics, University of Udine, Udine, Italy; Department of Medicine, University of Udine, Udine, Italy
SlideJ funding source(s)
Partially supported and funded by the EU FP7 program, AIDPATH project, grant number 612471.

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