Small RNA sequencing data analysis bioinformatics software tools

Qualitative and quantitative analysis of small non-coding RNAs by next generation sequencing (smallRNA-Seq) represents a novel technology increasingly used to investigate with high sensitivity and specificity RNA population comprising microRNAs and other regulatory small…

sRNA-seq analysis steps

sRNA-seq analysis workflow

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sRNA-seq analysis workflow schema

Small RNA sequencing data analysis bioinformatics software tools

Most Recent Tools

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RNA workbench
Server

RNA workbench

Establishes a central, redistributable workbench for scientists and programmers…

Establishes a central, redistributable workbench for scientists and programmers working with RNA-related data. The RNA workbench builds a sustainable community around it. This platform is unique in…

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Smallrnaseq
Desktop

Smallrnaseq

Can quantify and analyze small non-coding RNA species (sncRNAs). Smallrnaseq…

Can quantify and analyze small non-coding RNA species (sncRNAs). Smallrnaseq allows general analysis of small RNAs and not just miRNAs. It can be integrated into another platform thank to the…

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miRMOD
Desktop

miRMOD miRNA modifications/isoMIRs

Identifies and analyses non-templated nucleotide additions and trimming at both…

Identifies and analyses non-templated nucleotide additions and trimming at both the termini of the miRNA sequences in sRNA next generation sequencing (NGS) data. miRMOD is a Windows-based standalone…

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miFRame
Web

miFRame

Performs quantification of expression on miRNA precursors and mature forms of…

Performs quantification of expression on miRNA precursors and mature forms of miRNAs, and allows for discovering differentially expressed markers. miFRame is a software for the analysis of single…

Most Popular Tools

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omiRas
Web

omiRas

A Web service for the analysis of ncRNA datasets derived from Illumina sRNA-Seq…

A Web service for the analysis of ncRNA datasets derived from Illumina sRNA-Seq experiments. Starting with raw sequencing data, omiRas offers an efficient way to analyze differential expression of…

Curators for sRNA-seq analysis

  • Abdoulaye Baniré Diallo's avatar image
    Abdoulaye Baniré Diallo
    Department of Computer Sciences,…

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