Small RNA sequencing data analysis bioinformatics software tools

sRNA-seq analysis steps

sRNA-seq analysis workflow

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sRNA-seq analysis workflow schema
Qualitative and quantitative analysis of small non-coding RNAs by next generation sequencing (smallRNA-Seq) represents a novel technology increasingly used to investigate with high sensitivity and specificity RNA population comprising microRNAs and…

Small RNA sequencing data analysis bioinformatics software tools

Most Recent Tools

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RNAspace.org
Desktop
Web

RNAspace.org

Allows to create web sites dedicated to non-protein-coding RNA (ncRNA)…

Allows to create web sites dedicated to non-protein-coding RNA (ncRNA) prediction, annotation and analysis. RNAspace is an environment that allow users to run a variety of tools in an integrated and…

MINTmap
Desktop

MINTmap MItochondrial and Nuclear TRF mapping

Identifies the subset of discovered transfer RNA fragments (tRFs) that could be…

Identifies the subset of discovered transfer RNA fragments (tRFs) that could be originating outside of tRNA space and flags them as candidate false positives. MINTmap is a method and a software…

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sRNA mapper
Web

sRNA mapper

Maps sRNAs onto input genes. sRNA mapper is part of SoMART, the Server for…

Maps sRNAs onto input genes. sRNA mapper is part of SoMART, the Server for plant miRNA/tasiRNA Analysis Resources and Tools. sRNA mapper maps small RNAs (sRNAs) from selected sRNAdb database(s) to an…

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PreMIR detector
Web

PreMIR detector

Identifies miRNA precursors (MIRs) or tasiRNA precursor (TASs) of input small…

Identifies miRNA precursors (MIRs) or tasiRNA precursor (TASs) of input small RNA (sRNA). PreMIR detector is part of SoMART, the Server for plant miRNA/tasiRNA Analysis Resources and Tools. PreMIR…

Most Popular Tools

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omiRas
Web

omiRas

A Web service for the analysis of ncRNA datasets derived from Illumina sRNA-Seq…

A Web service for the analysis of ncRNA datasets derived from Illumina sRNA-Seq experiments. Starting with raw sequencing data, omiRas offers an efficient way to analyze differential expression of…

Curators for sRNA-seq analysis

  • Abdoulaye Baniré Diallo's avatar image
    Abdoulaye Baniré Diallo
    Department of Computer Sciences,…

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