Small RNA sequencing data analysis software tools

Small RNA sequencing data analysis software tools Small non-coding RNA (ncRNA or sRNA) are RNA molecules that do not translate into functional proteins. There are several families of ncRNA, including microRNA, small interfering RNA (siRNA), transfer RNA (tRNA) etc. NcRNA are involved in various biological processes, such as RNA splicing, post-transcriptional modifications, gene silencing, and in diseases including cancer and Alzheimer’s. Small RNA sequencing (sRNA-seq) uses high-throughput method to isolate and sequence small RNA species. Software analysis tools are used for processing, quantification, and identification of sRNA.

Protein interactions

Data preprocessing

Data processing

Quantification

Genome variant analysis

Data analysis

Annotation

Variant effect analysis

Genome-wide association study/Linkage/QTL

Data visualization

Classification/Clustering

Network analysis

Enrichment analysis

Workflows

File manipulation

Utilities

Unclassified tools