SMALT specifications

Unique identifier:
OMICS_00686
Interface:
Command line interface
Input format:
FASTA, FASTQ
Output format:
SAM
Operating system:
Unix/Linux
License:
GNU General Public License version 2.0
Stability:
Stable
Software type:
Package/Module
Restrictions to use:
None
Output data:
The output is written to the file map.sam in SAM output format using soft clipping of sequences.
Biological technology:
Illumina, Life Technologies, Pacific Biosciences, Roche
Programming languages:
C
Computer skills:
Advanced
Maintained:
Yes

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SMALT distribution

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SMALT support

Maintainer

  • Hannes Ponstingl <>

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