SMART specifications

Information


Unique identifier OMICS_25983
Name SMART
Alternative name Scalable Multiple Annotation integration for trait-Relevant Tissue identification
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 3.0
Computer skills Advanced
Version 0.10
Stability Stable
Maintained Yes

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Maintainers


  • person_outline Xingjie Hao
  • person_outline Xingjie Hao

Publication for Scalable Multiple Annotation integration for trait-Relevant Tissue identification

SMART citation

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Identifying and exploiting trait relevant tissues with multiple functional annotations in genome wide association studies

2018
PLoS Genet
PMCID: 5805369
PMID: 29377896
DOI: 10.1371/journal.pgen.1007186

[…] us to apply parameter estimates from the inferred trait-relevant tissues as SNP weights to construct SNP set test and power new association studies. We refer to our overall analytic procedure as the Scalable Multiple Annotation integration for trait-Relevant Tissue identification (SMART). We provide an overview of our method in the Materials and Methods section, with details described in the . Wi […]

SMART institution(s)
Key Laboratory of Agricultural Animal Genetics, Breeding and Reproduction of Ministry of Education, Huazhong Agricultural University, Wuhan, China; Department of Biostatistics, University of Michigan, Ann Arbor, MI, USA; Center for Statistical Genetics, University of Michigan, Ann Arbor, MI, USA

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