SMIPS specifications

Unique identifier:
OMICS_17103
Restrictions to use:
None
Input format:
Fasta or the formats of InterProScan or the JGI tables
Computer skills:
Basic
Source code URL:
https://sbi.hki-jena.de/smips/Download.php
Interface:
Web user interface
Input data:
A protein file or an InterProScan output file.
Programming languages:
Perl
Stability:
Stable
Maintained:
Yes

SMIPS specifications

Unique identifier:
OMICS_17103
Interface:
Command line interface
Operating system:
Unix/Linux, Windows
License:
GNU General Public License version 3.0
Stability:
Stable
Maintained:
Yes
Software type:
Package/Module
Restrictions to use:
None
Programming languages:
Perl
Computer skills:
Advanced
Source code URL:
https://sbi.hki-jena.de/smips/Download.php

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SMIPS support

Documentation

Maintainer

  • Ekaterina Shelest <>
  • Ekaterina Shelest <>

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Credits

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Publications

Institution(s)

Research Group Systems Biology/Bioinformatics, Leibniz Institute for Natural Product Research and Infection Biology, Jena, Germany; Hans-Knoll-Institute (HKI), Jena, Germany

Funding source(s)

Supported by the International Leibniz Research School for Microbial and Molecular Interactions (ILRS), as part of the excellence graduate school Jena School for Microbial Communication (JSMC), the Deutsche Forschungsgemeinschaft (DFG) and the Collaborative Research Centre ChemBioSys (CRC 1127 ChemBioSys), funded by the DFG. Results can be used to describe the secondary metabolites (SM) biosynthetic potential of a species.

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