SMIPS specifications

Information


Unique identifier OMICS_17103
Interface Web user interface
Restrictions to use None
Input data A protein file or an InterProScan output file.
Input format Fasta or the formats of InterProScan or the JGI tables
Programming languages Perl
Computer skills Basic
Stability Stable
Source code URL https://sbi.hki-jena.de/smips/Download.php
Maintained Yes

Documentation


Maintainer


  • person_outline Ekaterina Shelest <>

Information


Unique identifier OMICS_17103
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Windows
Programming languages Perl
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Source code URL https://sbi.hki-jena.de/smips/Download.php
Maintained Yes

Versioning


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Documentation


Maintainer


  • person_outline Ekaterina Shelest <>

SMIPS article

SMIPS institution(s)
Research Group Systems Biology/Bioinformatics, Leibniz Institute for Natural Product Research and Infection Biology, Jena, Germany; Hans-Knoll-Institute (HKI), Jena, Germany
SMIPS funding source(s)
Supported by the International Leibniz Research School for Microbial and Molecular Interactions (ILRS), as part of the excellence graduate school Jena School for Microbial Communication (JSMC), the Deutsche Forschungsgemeinschaft (DFG) and the Collaborative Research Centre ChemBioSys (CRC 1127 ChemBioSys), funded by the DFG. Results can be used to describe the secondary metabolites (SM) biosynthetic potential of a species.

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