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Protocols

SMoS specifications

Information


Unique identifier OMICS_26318
Name SMoS
Alternative name Structural Motifs of Superfamilies
Restrictions to use None
Database management system PostgreSQL
Community driven No
Data access Browse
User data submission Not allowed
Version 2.0
Maintained Yes

Maintainer


  • person_outline Ramanathan Sowdhamini

Publication for Structural Motifs of Superfamilies

SMoS citations

 (3)
call_split

AMPA GluA1 flip targeted oligonucleotide therapy reduces neonatal seizures and hyperexcitability

2017
PLoS One
PMCID: 5298276
PMID: 28178321
DOI: 10.1371/journal.pone.0171538
call_split See protocol

[…] re defined using three prediction tools: ESE Finder [], RESCUE-ESE [], and PESX []. ESSs were defined using PESX and FAS-ESS tools []. Finally, ISEs were predicted using the ACESCAN2 application [,]. SMOs were screened using BLASTN analysis for potential hybridization to off-target sites in the human genome. These analyses were combined to identify top candidate SMOs. In sillico analysis allowed f […]

library_books

Multivariate and Multiscale Data Assimilation in Terrestrial Systems: A Review

2012
PMCID: 3571784
PMID: 23443380
DOI: 10.3390/s121216291

[…] he EnKF with a statistical upscaling in order to introduce fine-scale hydraulic conductivity data into a coarse-scale groundwater flow and mass transport model. Merlin et al. [] assimilated simulated SMOS observations to a distributed SVAT model with the EnKF. In principle, two data sets are used for the assimilation of one state variable. Prior downscaling was performed with fine-scale soil skin […]

library_books

Molecular evolution of the polyamine oxidase gene family in Metazoa

2012
BMC Evol Biol
PMCID: 3517346
PMID: 22716069
DOI: 10.1186/1471-2148-12-90

[…] functions are addressed by two specialized polyamine oxidase subfamilies (APAO and SMO), it can be hypothesized an ancestral reference for PAO enzymes and a paralogous relationships between APAOs and SMOs. Yet, we still have a limited knowledge on the structural and functional diversity of metazoans polyamine oxidases and their evolutionary history has never been studied.In this study we developed […]

Citations

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SMoS institution(s)
National Centre for Biological Sciences (NCBS), Bangalore, India; Centre for Biotechnology, Anna University, Chennai, India

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