Protocols

SNAGEE specifications

Information


Unique identifier OMICS_02035
Name SNAGEE
Alternative name Signal-to-Noise applied to Gene Expression Experiments
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License Artistic License version 2.0
Computer skills Advanced
Version 1.20.0
Stability Stable
Requirements
R(>=2.6.0), hgu95av2.db, ALL, SNAGEEdata
Maintained Yes

Download


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Versioning


No version available

Documentation


Maintainer


  • person_outline David Venet

SNAGEE citation

call_split

A Measure of the Signal to Noise Ratio of Microarray Samples and Studies Using Gene Correlations

2012
PLoS One
PMCID: 3520972
PMID: 23251415
DOI: 10.1371/journal.pone.0051013
call_split See protocol

[…] SNAGEE was compared with simpleaffy, NUSE, RLE, GNUSE and MDQC. Simpleaffy is an R package that can be used to calculate quality metrics on an array. Those metrics are based on array-wide measures (e. […]

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