sNMF protocols

sNMF specifications


Unique identifier OMICS_22407
Name sNMF
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS
Computer skills Advanced
Version 1.2
Stability Stable
Maintained Yes



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  • person_outline Olivier Francois <>

Publication for sNMF

sNMF IN pipeline

PMCID: 4578943
PMID: 26394036
DOI: 10.1371/journal.pone.0131800

[…] sylvisorex granti complex and species therein, n = 52,580)., we further examined population structure and assignment of genotypes to populations using the population clustering method implemented in snmf [40], a new method for estimating individual ancestry coefficients that accommodates large population genomic data sets through the use of an efficient likelihood algorithm without loss […]

sNMF institution(s)
Université Joseph Fourier Grenoble 1, Centre National de la Recherche Scientifique, Techniques de l’Ingénierie Médicale et de la Complexité - Informatique, Mathématiques et Applications, Grenoble Unité Mixte de Recherche 5525, Grenoble, France; Xerox Research Center Europe, Meylan, France
sNMF funding source(s)
Supported by a grant from la Région Rhône-Alpes and by Grenoble Institute of Technology.

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