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Small nucleolar RNA databases | Non-coding RNA data analysis

Small nucleolar ribonucleoproteins (snoRNPs) are widely studied and characterized as guide RNAs for sequence-specific 2'-O-ribose methylation and psuedouridylation of ribosomal RNAs. In addition, snoRNAs have also been shown to interact with some…
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NSDNA
Dataset

NSDNA Nervous System Disease NcRNAome Atlas

A manually curated database that provides comprehensive experimentally…

A manually curated database that provides comprehensive experimentally supported associations about nervous system diseases (NSDs) and noncoding RNAs (ncRNAs). NSDNA database documents 24713…

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ncRDeathDB
Dataset

ncRDeathDB

A comprehensive bioinformatics resource to archive non-coding RNA…

A comprehensive bioinformatics resource to archive non-coding RNA (ncRNA)-associated cell death interactions. ncRDeathDB documents a total of more than 4600 ncRNA-mediated programmed cell death (PCD)…

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Plant snoRNA…
Dataset

Plant snoRNA Database

Provides information on small nucleolar RNAs from Arabidopsis and eighteen…

Provides information on small nucleolar RNAs from Arabidopsis and eighteen other plant species. Information includes sequences, expression data, methylation and pseudouridylation target modification…

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DASHR
Dataset

DASHR Database of small human noncoding RNAs

Contains the most comprehensive information to date on human small non-coding…

Contains the most comprehensive information to date on human small non-coding RNAs (sncRNA) genes and mature sncRNA products. DASHR provides a simple user interface for researchers to view sequence…

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uRNADB
Dataset

uRNADB uRNA database

Provides aligned, annotated and phylogenetically ordered sequences. The uRNADB…

Provides aligned, annotated and phylogenetically ordered sequences. The uRNADB is a database for the study of the structures and functions of various U RNAs. The alignments of the sequences represent…

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snoRNA-LBME-db
Dataset

snoRNA-LBME-db

A dedicated database containing human C/D box and H/ACA box small nucleolar…

A dedicated database containing human C/D box and H/ACA box small nucleolar RNAs (snoRNAs), and small Cajal body-specific RNAs (scaRNAs). snoRNA-LBME-db was built by a compilation of the literature,…

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snOPY
Dataset

snOPY snoRNA Orthological Gene Database

Allows studying of RNA modifications and Small nucleolar RNAs (snoRNA) gene…

Allows studying of RNA modifications and Small nucleolar RNAs (snoRNA) gene evolution. snOPY is a database that provides three types of information: snoRNA, snoRNA gene locus, and target RNA. The…

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RNAdb
Dataset

RNAdb

Provides a database of mammalian non-protein-coding RNAs (ncRNAs). RNAdb is an…

Provides a database of mammalian non-protein-coding RNAs (ncRNAs). RNAdb is an online resource that (i) provides a searchable sequence repository for mammalian ncRNAs whose function may be regulatory…

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Sno/scaRNAbase
Dataset

Sno/scaRNAbase

A curated database for small nucleolar RNAs (snoRNAs) and small cajal…

A curated database for small nucleolar RNAs (snoRNAs) and small cajal body-specific RNAs (scaRNAs). Sno/scaRNAbase is not only dedicated to filling gaps between existing organism-specific sno/scaRNA…

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snoRNP database
Dataset

snoRNP database Small nucleolar ribonucleoprotein database

A web-based collection of snoRNA and snoRNA-associated protein sequences from a…

A web-based collection of snoRNA and snoRNA-associated protein sequences from a wide range of species. snoRNP database currently contains over 1,000 snoRNA sequences from Bacteria, Archaea, and…

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