SnowyOwl statistics

To access cutting-edge analytics on consensus tools, life science contexts and associated fields, you will need to subscribe to our premium service.

Subscribe
info

Citations per year

Citations chart
info

Popular tool citations

chevron_left Gene prediction chevron_right
Popular tools chart
info

Tool usage distribution map

Tool usage distribution map
info

Associated diseases

Associated diseases

SnowyOwl specifications

Information


Unique identifier OMICS_07019
Name SnowyOwl
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Python
License BSD 2-clause “Simplified” License
Computer skills Advanced
Version 2.0.3
Stability Stable
Requirements
Perl, BioPython, Augustus, GeneMark-ES, NCBI Blast+, exonerate, blat, samtools, tabix, cd-hit
Maintained Yes

Versioning


Add your version

Information


Unique identifier OMICS_07019
Name SnowyOwl
Interface Web user interface
Restrictions to use None
Programming languages PHP, Python
Computer skills Basic
Version 2.0.3
Stability Stable
Maintained Yes

Publication for SnowyOwl

SnowyOwl in publications

 (2)
PMCID: 5014426
PMID: 27603307
DOI: 10.1371/journal.pone.0162363

[…] parallel pipelines: 1) a customized in-house to search for sequences present in the ncbi y. lipolytica database (http://www.ncbi.nlm.nih.gov/); 2) yeast genome annotation pipeline (ygap) []; and 3) snowyowl fungal genome analysis [] (, ). the results of this analysis are summarized in and . subsequent to this primary analysis, multiple comparisons were made between clib89 yali1 and clib122 […]

PMCID: 4686921
PMID: 26690577
DOI: 10.1371/journal.pone.0144769

[…] performance of existing gene prediction tools still is unsatisfactory []. recently, improvements in fungal gene prediction were achieved by using rna-seq and homology information implemented in the snowyowl pipeline []. another important factor affecting gene model development for gene prediction is the degree of fragmentation in eukaryotic genome projects after assemblies. frequently genes […]


To access a full list of publications, you will need to upgrade to our premium service.

SnowyOwl institution(s)
Centre for Structural and Functional Genomics, Concordia University, Montreal, QC, Canada

SnowyOwl reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review SnowyOwl