SNPMap specifications

Information


Unique identifier OMICS_29413
Name SNPMap
Restrictions to use None
Community driven No
Data access Browse
User data submission Not allowed
Maintained Yes

Taxon


  • Plants and Fungi
    • Candida albicans

Maintainers


  • person_outline Richard Bennett
  • person_outline Matthew Anderson

Publication for SNPMap

SNPMap citations

 (2)
library_books

UPDG: Utilities package for data analysis of Pooled DNA GWAS

2012
BMC Genet
PMCID: 3293712
PMID: 22252406
DOI: 10.1186/1471-2156-13-1

[…] ata from one or two data pools. In most applications, multiple DNA pools are constructed and each tested in multiple technical replicates - a study design that cannot be properly handled by MPDA. The SNPMaP package [] was developed solely for the Affymetrix platform. Its functionality is limited to fundamental data manipulation and does not support subsequent association testing. Recently, GPFront […]

library_books

The SNPMaP package for R: a framework for genome wide association using DNA pooling on microarrays

2008
Bioinformatics
PMCID: 2639010
PMID: 19008252
DOI: 10.1093/bioinformatics/btn587

[…] The SNPMaP package represents an evolution of R scripts that have been used by us (e.g. Meaburn et al., , ) and others (e.g. Wilkening et al., ) for processing SNPMaP data. Although a few other software a […]

SNPMap institution(s)
Department of Molecular Microbiology and Immunology, Brown University, Providence, RI, USA; Department of Microbiology, The Ohio State University, Columbus, OH, USA; Department of Microbial Infection and Immunity, The Ohio State University, Columbus, OH, USA
SNPMap funding source(s)
Supported by National Institutes of Health grants AI081704 637 and AI122011, a PATH award from the Burroughs Wellcome Fund, and by a Karen T. Romer Undergraduate Teaching and Research Award.

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