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SNPnexus

Provides a comprehensive set of annotations for genomic variation data by characterizing related functional consequences at the transcriptome/proteome levels of seven major annotation systems with in-depth analysis of potential deleterious effects, inferring physical and cytogenetic mapping, reporting information on HapMap genotype/allele data, finding overlaps with potential regulatory elements, structural variations and conserved elements, and retrieving links with previously reported genetic disease studies. SNPnexus has a user-friendly web interface with an improved query structure, enhanced functional annotation categories and flexible output presentation making it practically useful for biologists.

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SNPnexus classification

  • Animals
    • Homo sapiens

SNPnexus specifications

Interface:
Web user interface
Computer skills:
Basic
Maintained:
Yes
Restrictions to use:
None
Stability:
Stable

SNPnexus support

Maintainer

  • Claude Chelala <>

Credits

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Publications

Institution(s)

Barts Cancer Institute, Queen Mary University of London, London, UK

Link to literature

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