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SNPPicker specifications


Unique identifier OMICS_26123
Name SNPPicker
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes




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  • person_outline Jean-Pierre Kocher <>
  • person_outline Hugues Sicotte <>

Publication for SNPPicker

SNPPicker citation


Genetic markers associated with abstinence length in alcohol dependent subjects treated with acamprosate

PMCID: 4350512
PMID: 25290263
DOI: 10.1038/tp.2014.103

[…] third, we included candidate genes reported to be associated with acamprosate treatment outcomes in human or animal studies, , and genes associated with alcoholism treatment response., , , we used snppicker for selection of tag single-nucleotide polymorphisms (snps) to attain comprehensive coverage of each candidate gene. in addition, 28 snps were selected from a panel of ancestry informative […]

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SNPPicker institution(s)
Department of Biomedical Statistics and Informatics, Mayo Clinic, Rochester, MN, USA; Department of Internal Medicine, Mayo Clinic, Rochester, MN, USA
SNPPicker funding source(s)
Supported by funding from the development fund of the Bioinformatics Core at Mayo Clinic, funds from the center for individualized Medicine at the Mayo Clinic, and funding from NIH grants AI 40065, AI 058793-48793.

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