SOAPdenovo specifications

Unique identifier:
OMICS_00031
Software type:
Package/Module
Restrictions to use:
None
Operating system:
Unix/Linux, Mac OS, Windows
License:
GNU General Public License version 3.0
Version:
2.0
Requirements:
GCC
Alternative name:
SOAPdenovo2
Interface:
Command line interface
Biological technology:
Illumina
Programming languages:
C, C++
Computer skills:
Advanced
Stability:
Stable
Maintained:
Yes

versioning

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SOAPdenovo distribution

download

SOAPdenovo support

Documentation

Maintainers

  • Jun Wang <>
  • SOAPdenovo Team <>

Additional information

https://sourceforge.net/projects/soapdenovo2/

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Credits

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Publications

Institution(s)

BGI HK Research Institute, Tai Po Industrial Estate, Hong Kong; HKU-BGI Bioinformatics Algorithms and Core Technology Research Laboratory & Department of Computer Science, University of Hong Kong, Pokfulam, Hong Kong; School of Bioscience and Bioengineering, South China University of Technology, Guangzhou, China; School of Computer Science, National University of Defense Technology, Kaifu District, Changsha, Hunan, China

Funding source(s)

The project was supported by the State Key Development Program for Basic Research of China-973 Program (2011CB809203), National High Technology Research and Development Program of China-863 program (2012AA02A201), the National Natural Science Foundation of China (90612019), the Shenzhen Key Laboratory of Trans-omics Biotechnologies (CXB201108250096A), the Shenzhen Municipal Government of China (JC201005260191A and CXB201108250096A), and partially supported by RGC General Research Fund 10612042.

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