Socrates specifications

Information


Unique identifier OMICS_02200
Name Socrates
Alternative name SOft Clip re-alignment To idEntify Structural variants
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Java
License Apache License version 2.0, GNU General Public License version 3.0, MIT License
Computer skills Advanced
Version 1.13.1
Stability Stable
Maintained Yes

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Documentation


Maintainers


  • person_outline Anthony Papenfuss <>
  • person_outline Socrates Team <>

Socrates article

Socrates institution(s)
Bioinformatics Division, The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia; Department of Medical Biology, University of Melbourne, VIC, Australia; Melanoma Research Laboratory, Peter MacCallum Cancer Centre, East Melbourne, VIC, Australia; Department of Pathology, The University of Melbourne, VIC, Australia; NICTA Victoria Laboratory, The University of Melbourne, VIC, Australia; Department of Computing and Information Systems, University of Melbourne, VIC, Australia; Cancer Therapeutics Program, Peter MacCallum Cancer Centre, East Melbourne, VIC, Australia; Sir Peter MacCallum Department of Oncology, The University of Melbourne, VIC, Australia; Department of Mathematics and Statistics, The University of Melbourne, VIC, Australia; Bioinformatics and Cancer Genomics Laboratory, Peter MacCallum Cancer Centre, East Melbourne, VIC, Australia
Socrates funding source(s)
Supported by a National Health and Medical Research Council (NHMRC) Project Grant (637357), Victorian State Government Operational Infrastructure Support, Australian Government NHMRC IRIISS, the Melbourne Melanoma Project, the Victorian Cancer Biobank and the Victorian Cancer Agency, a Cancer Council of Victoria scholarship, NICTA funded by the Australian Government as represented by the Department of Broadband, Communications and the Digital Economy and the Australian Research Council through the ICT Centre of Excellence program, NHMRC Principal Research Fellowship, The Cancer Council Victoria, The Leukaemia Foundation of Australia and the Victorian Cancer Agency, fellowships from Pfizer Australia and VESKI, an NHMRC Career Development Fellowship (1003856) and The Lorenzo and Pamela Galli Melanoma Research Fellowship.

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