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  4. Repetitive DNA
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A sensitive structural variant (SV) detection tool for Illumina paired-end next-generation sequencing data.

Specifications

Software type:
Package
Interface:
Command line interface
Restrictions to use:
None
Biological technology:
Illumina
Operating system:
Unix/Linux
Programming languages:
Perl
License:
GNU General Public License version 2.0
Computer skills:
Advanced
Stability:
Stable
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Publications

  • (Hart et al., 2013) SoftSearch: integration of multiple sequence features to identify breakpoints of structural variations. PloS one.
    PMID: 24358278

Classification

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