SonicParanoid specifications

Information


Unique identifier OMICS_31188
Name SonicParanoid
Software type Application/Script
Interface Command line interface
Input data Some files containing protein sequences.
Input format FASTA
Operating system Unix/Linux, Mac OS
Programming languages Python
License GNU General Public License version 3.0
Computer skills Advanced
Version 1.0.11
Stability Stable
Requirements GNU GCC compiler, CMake
Source code URL https://pypi.org/project/sonicparanoid/#files
Maintained Yes

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Documentation


Additional information


https://bitbucket.org/salvocos/sonicparanoid https://www.youtube.com/watch?v=UQ5DDeyJ_98

Publication for SonicParanoid

SonicParanoid institution(s)
Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan; Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, The University of Tokyo, Chiba, Japan; Atmosphere and Ocean Research Institute, The University of Tokyo, Chiba, Japan
SonicParanoid funding source(s)
Supported by the Japanese Society for the Promotion of Science (Grant Numbers 16H06154, 16H06279, and 17H05834).

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