sORF finder pipeline

sORF finder specifications

Information


Unique identifier OMICS_18335
Name sORF finder
Alternative name Small Open Reading Frames
Interface Web user interface
Restrictions to use None
Input data Some nucleotide sequences.
Input format FASTA
Programming languages Perl
Computer skills Basic
Stability Stable

Maintainer


This tool is not available anymore.

Information


Unique identifier OMICS_18335
Name sORF finder
Alternative name Small Open Reading Frames
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data Some nucleotide sequences.
Input format FASTA
Operating system Unix/Linux
Programming languages Perl
Computer skills Advanced
Stability Stable

Versioning


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Maintainer


This tool is not available anymore.

Publication for Small Open Reading Frames

sORF finder institution(s)
Plant Science Center, RIKEN, Yokohama, Japan; Bioinformatics and Systems Engineering Division, RIKEN, Yokohama, Japan; Department of Plant Biology, Michigan State University, East Lansing, MI, USA
sORF finder funding source(s)
RIKEN Plant Science Center, a program for promotion of Basic Research Activities for Innovative Biosciences (PROBRAIN); National Science Foundation grant (MCB-0749634).

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