SIRAH tools specifications

Unique identifier:
OMICS_13262
Software type:
Toolkit/Suite
Restrictions to use:
None
Input format:
PDB, PQR
Operating system:
Unix/Linux, Mac OS, Windows
Computer skills:
Advanced
Requirements:
GROMACS, VMD
Name:
Southamerica Initiative for a Rapid and Accurate Hamiltonian tools
Interface:
Command line interface
Input data:
Heavy atoms composing the DNA molecule
Output data:
Transforms residue coordinates to coarse-grained following mapping rules described in, so called, map files.
Programming languages:
Perl
Stability:
Stable
Maintained:
Yes

versioning

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SIRAH tools distribution

download

SIRAH tools support

Documentation

Maintainer

  • Matias Machado <>

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Publications

Institution(s)

Biomolecular simulations, Institut Pasteur de Montevideo, Montevideo, Uruguay

Funding source(s)

This work was partially funded by FOCEM (MERCOSUR Structural Convergence Fund), COF 03/11.

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