Soybean Proteome Database specifications

Information


Unique identifier OMICS_22515
Name Soybean Proteome Database
Restrictions to use Academic or non-commercial use
Community driven No
Data access Browse
User data submission Not allowed
Maintained Yes

Taxon


  • Plants and Fungi
    • Glycine max

Maintainers


  • person_outline Setsuko Komatsu
  • person_outline Soybean Proteome Database Team

Publications for Soybean Proteome Database

Soybean Proteome Database citation

library_books

Genome Wide Analyses of the Soybean F Box Gene Family in Response to Salt Stress

2017
Int J Mol Sci
PMCID: 5412402
PMID: 28417911
DOI: 10.3390/ijms18040818

[…] To identify possible members of the F-box protein-coding gene family in soybean, two strategies were used. First, the HMMER3.0 software [] was employed to search against the soybean proteome database Glycine max Wm82.a2.v1 [] using the hidden Markov model (HMM) profile () of F-box motifs (PF00646) downloaded from Pfam [] as queries. A total of 708 transcripts from 503 gen […]

Soybean Proteome Database institution(s)
Tsukuba Division, Mitsubishi Space Software Co., Ltd, Tsukuba, Japan; Plant Genetics Laboratory, National Institute of Genetics, Mishima, Japan; Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi, Japan; National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba, Japan
Soybean Proteome Database funding source(s)
Supported by grants from the National Agriculture and Food Research Organization, Japan.

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