SPADE specifications


Unique identifier OMICS_29411
Alternative name Search for Patterned DNA Elements
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input format GenBank, FASTA
Output format GenBank
Operating system Unix/Linux, Mac OS
Programming languages Python
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Maintained Yes




No version available


  • person_outline Nozomu Yachie

Publication for Search for Patterned DNA Elements

SPADE institution(s)
Synthetic Biology Division, Research Center for Advanced Science and Technology, The University of Tokyo, Tokyo, Japan; Institute for Advanced Biosciences, Keio University, Tsuruoka, Japan; Systems Biology Program, Graduate School of Media and Governance, Keio University, Fujisawa, Japan; Department of Environment and Information Studies, Keio University, Fujisawa, Japan; Department of Biological Sciences, School of Science, The University of Tokyo, Tokyo, Japan; PRESTO, Japan Science and Technology Agency (JST), Tokyo, Japan
SPADE funding source(s)
Supported by the New Energy and Industrial Technology Development Organization (NEDO), by Japan Society for the Promotion of Science (JSPS), Japan Science, Technology Agency (JST) PRESTO program, Japan Agency for Medical Research and Development (AMED) PRIME program, The Naito Foundation, The Nakajima Foundation, The Takeda Foundation, SECOM Science and Technology Foundation, TTCK fellowships, the Mori Memorial Foundation, the Yamagishi Student Project Support Program of Keio University and a JSPS DC Fellowship.

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