SpatialDE specifications


Unique identifier OMICS_18613
Name SpatialDE
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Python
Computer skills Advanced
Stability Stable
Maintained Yes



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  • person_outline Valentine Svensson <>

Publication for SpatialDE

SpatialDE institution(s)
Wellcome Trust Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK; Theory of Condensed Matter Group, Cavendish Laboratory, Cambridge, UK; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK
SpatialDE funding source(s)
Supported by the EMBL International PhD Program, by the Wellcome Trust and ERC Consolidator Grant “ThDEFINE”, and by EMBL core funding.

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