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SpectroDive specifications


Unique identifier OMICS_30690
Name SpectroDive
Software type Application/Script
Interface Graphical user interface
Restrictions to use License purchase required
Biological technology Agilent Technologies
Operating system Windows
Computer skills Medium
Version 8
Stability Stable
Free trial Yes
Registration required Yes
Maintained Yes


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  • person_outline SpectroDive Team

SpectroDive citations


The endosomal transcriptional regulator RNF11 integrates degradation and transport of EGFR

PMCID: 5119934
PMID: 27872256
DOI: 10.1083/jcb.201601090

[…] estimated using linear mixed-effect models (as implemented in R package ‘nlme;’ version 3.1–103) as described previously by . Assay refinement, recalibrations, and data analysis were performed using SpectroDive (Biognosys AG). […]


Characterization and quantification of proteins secreted by single human embryos prior to implantation

PMCID: 4644378
PMID: 26471863
DOI: 10.15252/emmm.201505344

[…] SRM assay development, validation, and peptide quantification were performed using SpectroDive (a kind gift of Biognosys AG). Ten target peptides were selected among the most intense peptides identified in the shotgun experiments (only MonoPrep samples were considered). SRM assays w […]


Plasma preparation to measure FDA approved protein markers by selected reaction monitoring

PMCID: 4607682
PMID: 26471814
DOI: 10.1186/s40169-015-0071-4

[…] voltage on the electrode was 1900 V with the capillary temperature of 200 °C. The impact energy values were set in accordance with the SRM kit preferences [].The raw files obtained were processed by SpectroDive™ and Skyline programs. Transition lists were imported from SpectroDive™ into Skyline to generate.sky and .skyd files to place into PASSEL (ID PASS00633) [] and provide access to SRM spectr […]


In situ structural analysis of the human nuclear pore complex

PMCID: 4886846
PMID: 26416747
DOI: 10.1038/nature15381

[…] ed out as previously described ,; the p-value given in the legend of was calculated using a one-sided Welch t-test combined using Fisher's method. All the targeted proteomic data were analysed using SpectroDive (Biognosys AG). […]


Structural basis for assembly and function of the Nup82 complex in the nuclear pore scaffold

PMCID: 4315244
PMID: 25646085
DOI: 10.1083/jcb.201411003

[…] ding to the same protein were averaged and normalized to the Nup159 signal, resulting in the final stoichiometric readout. SRM assay refinement, recalibrations, and data analysis were performed using SpectroDive (Biognosys AG). […]


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SpectroDive institution(s)
Biognosys, Schlieren, Switzerland

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