SpectroGene specifications


Unique identifier OMICS_10898
Name SpectroGene
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data SpectroGene takes as input (i) deconvoluted top-down spectra and (ii) a genomic sequence.
Output data It outputs the report describing the found proteoforms and ORF clusters.
Operating system Unix/Linux
Programming languages Python
License BSD 3-clause “New” or “Revised” License
Computer skills Advanced
Version 1.0
Stability Stable
TopPIC, BioPython
Maintained Yes


No version available


Publication for SpectroGene

SpectroGene institution(s)
Department of Computer Science and Engineering, UCSD, La Jolla, CA, USA; Department of BioHealth Informatics, IUPUI, Indianapolis, IN, USA
SpectroGene funding source(s)
National Institutes of Health (grant 5P41GM103484)

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